{
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  "Title": "Age-Depth Radiocarbon Modelling",
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  "URL": "https://andrewcparnell.github.io/Bchron/",
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    "%>%",
    "BchronCalibrate",
    "BchronCheck",
    "BchronDensity",
    "BchronDensityFast",
    "Bchronology",
    "BchronRSL",
    "choosePositions",
    "coreInfluence",
    "createCalCurve",
    "dateInfluence",
    "hdr",
    "sampleAges",
    "unCalibrate"
  ],
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      ],
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        "ages",
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      ],
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      "table": true,
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      ],
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      "table": true,
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    },
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        "data.frame"
      ],
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      ],
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        "V2",
        "V3"
      ],
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      "table": true,
      "tojson": true
    },
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        "data.frame"
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        "V3",
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      "file": "shcal20.rda",
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        "V2",
        "V3",
        "V4",
        "V5"
      ],
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      "class": [
        "data.frame"
      ],
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        "id",
        "ages",
        "ageSds",
        "position",
        "thickness",
        "calCurves"
      ],
      "rows": 31,
      "table": true,
      "tojson": true
    },
    {
      "name": "TestChronData",
      "title": "Example chronology file for use with the BchronRSL function.",
      "object": "TestChronData",
      "file": "TestChronData.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "id",
        "ages",
        "ageSds",
        "position",
        "thickness",
        "calCurves"
      ],
      "rows": 27,
      "table": true,
      "tojson": true
    },
    {
      "name": "TestRSLData",
      "title": "Relative sea level data",
      "object": "TestRSLData",
      "file": "TestRSLData.rda",
      "class": [
        "data.frame"
      ],
      "fields": [
        "Depth",
        "RSL",
        "Sigma"
      ],
      "rows": 24,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "Bchron",
      "title": "Bchron: Radiocarbon dating, age-depth modelling, relative sea level rate estimation, and non-parametric phase modelling",
      "topics": [
        "Bchron-package",
        "Bchron"
      ]
    },
    {
      "page": "BchronCalibrate",
      "title": "Fast radiocarbon calibration",
      "topics": [
        "BchronCalibrate"
      ]
    },
    {
      "page": "BchronCheck",
      "title": "Check data for input into BchronCalibrate or Bchronology",
      "topics": [
        "BchronCheck"
      ]
    },
    {
      "page": "BchronDensity",
      "title": "Non-parametric phase model",
      "topics": [
        "BchronDensity"
      ]
    },
    {
      "page": "BchronDensityFast",
      "title": "Non-parametric phase model (faster version)",
      "topics": [
        "BchronDensityFast"
      ]
    },
    {
      "page": "Bchronology",
      "title": "Runs the Compound Poisson-Gamma chronology model of Haslett and Parnell (2008)",
      "topics": [
        "Bchronology"
      ]
    },
    {
      "page": "BchronRSL",
      "title": "Relative sea level rate (RSL) estimation",
      "topics": [
        "BchronRSL"
      ]
    },
    {
      "page": "choosePositions",
      "title": "Compute positions to date next which result in maximal decrease of chronological uncertainty",
      "topics": [
        "choosePositions"
      ]
    },
    {
      "page": "coreInfluence",
      "title": "Find the influence of dates in a pair of Bchronology runs across the core",
      "topics": [
        "coreInfluence"
      ]
    },
    {
      "page": "createCalCurve",
      "title": "Create a new calibration curve",
      "topics": [
        "createCalCurve"
      ]
    },
    {
      "page": "dateInfluence",
      "title": "Find the influence of the dates in a Bchronology run",
      "topics": [
        "dateInfluence"
      ]
    },
    {
      "page": "Glendalough",
      "title": "Glendalough data",
      "topics": [
        "Glendalough"
      ]
    },
    {
      "page": "hdr",
      "title": "Calculate highest density regions for Bchron calibrated ages",
      "topics": [
        "hdr"
      ]
    },
    {
      "page": "intcal13",
      "title": "Northern hemisphere 2013 calibration curve",
      "topics": [
        "intcal13"
      ]
    },
    {
      "page": "intcal20",
      "title": "Northern hemisphere 2020 calibration curve",
      "topics": [
        "intcal20"
      ]
    },
    {
      "page": "marine13",
      "title": "Marine 2013 calibration curve",
      "topics": [
        "marine13"
      ]
    },
    {
      "page": "marine20",
      "title": "Marine 2020 calibration curve",
      "topics": [
        "marine20"
      ]
    },
    {
      "page": "normal",
      "title": "Data for dummy calibration of normally distributed ages",
      "topics": [
        "normal"
      ]
    },
    {
      "page": "plot.BchronCalibratedDates",
      "title": "Plot calibrated dates from a BchronCalibrate run",
      "topics": [
        "plot.BchronCalibratedDates"
      ]
    },
    {
      "page": "plot.BchronDensityRun",
      "title": "Plot output from 'BchronDensity'",
      "topics": [
        "plot.BchronDensityRun"
      ]
    },
    {
      "page": "plot.BchronDensityRunFast",
      "title": "Plot run from 'BchronDensityFast'",
      "topics": [
        "plot.BchronDensityRunFast"
      ]
    },
    {
      "page": "plot.BchronologyRun",
      "title": "Plot output from Bchronology",
      "topics": [
        "plot.BchronologyRun"
      ]
    },
    {
      "page": "plot.BchronRSLRun",
      "title": "Plot output from BchronRSL",
      "topics": [
        "plot.BchronRSLRun"
      ]
    },
    {
      "page": "predict.BchronologyRun",
      "title": "Predict ages of other positions for a BchronologyRun object",
      "topics": [
        "predict.BchronologyRun"
      ]
    },
    {
      "page": "sampleAges",
      "title": "Get sample ages from a set of Bchron calibrated dates",
      "topics": [
        "sampleAges"
      ]
    },
    {
      "page": "shcal13",
      "title": "Southern hemisphere 2013 calibration curve",
      "topics": [
        "shcal13"
      ]
    },
    {
      "page": "shcal20",
      "title": "Southern hemisphere 2020 calibration curve",
      "topics": [
        "shcal20"
      ]
    },
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      "title": "Using Bayesian radiocarbon chronology package Bchron",
      "author": "Andrew Parnell",
      "engine": "knitr::rmarkdown",
      "headings": [
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        "Introduction",
        "Installing Bchron",
        "Calibrating radiocarbon dates",
        "Credible intervals",
        "Comparing ages",
        "Running the Bchronology age-depth model",
        "Obtaining sedimentation and accumulation rates",
        "Identifying influential dates and positions",
        "Running RSL rate estimation",
        "Running non-parametric phase estimation",
        "Including user-defined calibration curves",
        "Calibrating marine and other offset age ranges",
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        "Miscellaneous other queries",
        "Customising plots",
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      "modified": "2025-12-11 22:19:12",
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